Difference between revisions of "MyMediaWiki:About the articles"
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| Reactive glutamines | | Reactive glutamines | ||
| Glutamine residues modified by the enzyme | | Glutamine residues modified by the enzyme | ||
| − | If the crystal structure is available, a link to the picture of modified | + | If the crystal structure is available, a link to the picture of modified residue(s) is included |
|- | |- | ||
| Reactive lysines | | Reactive lysines | ||
| Lysine residues modified by the enzyme | | Lysine residues modified by the enzyme | ||
| − | If the crystal structure is available, a link to the picture of modified | + | If the crystal structure is available, a link to the picture of modified residue(s) is included |
|- | |- | ||
| Substrate sequence | | Substrate sequence | ||
| Line 44: | Line 44: | ||
|- | |- | ||
| Disorder prediction | | Disorder prediction | ||
| − | | Link to [http://iupred.enzim.hu/index.html IUPred]predictor of intrinsically disorder in proteins | + | | Link to [http://iupred.enzim.hu/index.html IUPred]a predictor of intrinsically disorder in proteins |
|- | |- | ||
| Reference | | Reference | ||
Revision as of 11:29, 24 July 2007
This is an example how information is organized in our wiki:
| Template:Infobox header| Name of substrate protein | |
|---|---|
| Name of substrate protein | |
| Substrate peptide name | Name of substrate protein |
| Synonyms | Alternative scientific name(s) of substrate protein |
| Determination type | In situ/In vitro |
| Source | Species in which the protein was studied |
| Subcellular localization | Ex. Plasma membrane |
| Swissprot ID | Link to the protein's Uniprot ID |
| Reactive glutamines | Glutamine residues modified by the enzyme
If the crystal structure is available, a link to the picture of modified residue(s) is included |
| Reactive lysines | Lysine residues modified by the enzyme
If the crystal structure is available, a link to the picture of modified residue(s) is included |
| Substrate sequence | Sequence containing the residue modified by the enzyme
with the modified residue(s) in italic |
| Structure | Link to the crystal structure (if available) deposited in RCSB PDB |
| Surface accessibility | Surface accessibility data obtained with ASAView web server for those substrate proteins
where the modification site is known and the crystal structure contains these residues |
| Disorder prediction | Link to IUPreda predictor of intrinsically disorder in proteins |
| Reference | Links to scientific article(s) about determination of transglutaminase substrate proteins through their PubMed ID:PMID |
| Notes | Relevant informations other than above mentioned about substrate proteins |
| Template:Infobox header | | |
