Difference between revisions of "MyMediaWiki:About the articles"
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| Substrate peptide name | | Substrate peptide name | ||
| − | | | + | | Name of substrate protein |
|- | |- | ||
| Synonyms | | Synonyms | ||
| − | | | + | | Alternative scientific name(s) of substrate protein |
|- | |- | ||
| Determination type | | Determination type | ||
| Line 16: | Line 16: | ||
|- | |- | ||
| Source | | Source | ||
| − | | | + | | Species in which the protein was studied |
|- | |- | ||
| Subcellular localization | | Subcellular localization | ||
| − | | Plasma membrane | + | | Ex. Plasma membrane |
|- | |- | ||
| Swissprot ID | | Swissprot ID | ||
| − | | | + | | Link to the protein's Uniprot ID |
|- | |- | ||
| Reactive glutamines | | Reactive glutamines | ||
| − | | | + | | Glutamine residues modified by the enzyme |
| + | If the crystal structure is available, a link to the picture of modified residues is included | ||
|- | |- | ||
| Reactive lysines | | Reactive lysines | ||
| − | | | + | | Lysine residues modified by the enzyme |
| + | If the crystal structure is available, a link to the picture of modified residues is included | ||
|- | |- | ||
| Substrate sequence | | Substrate sequence | ||
| − | | | + | | Sequence containing the residue modified by the enzyme |
| + | with the modified residue(s) in ''italic'' | ||
|- | |- | ||
| Structure | | Structure | ||
| − | | | + | | Link to the crystal structure (if available) deposited in RCSB webPDB |
|- | |- | ||
| Surface accessibility | | Surface accessibility | ||
| − | | | + | | Surface accessibility data obtained with ASAView web server for those substrate proteins |
| + | where the modification site is known and the crystal structure contains these residues | ||
|- | |- | ||
| Disorder prediction | | Disorder prediction | ||
| − | | [http://iupred.enzim.hu/index.html IUPred] | + | | Link to [http://iupred.enzim.hu/index.html IUPred]predictor of intrinsically disorder in proteins |
|- | |- | ||
| Reference | | Reference | ||
| − | | | + | | Links to scientific article(s) about determination of transglutaminase substrate proteins through the PubMed ID:PMID |
|- | |- | ||
| Notes | | Notes | ||
| − | | | + | | Relevant informations other than above mentioned about substrate proteins |
|- | |- | ||
| {{infobox header}} | | | {{infobox header}} | | ||
|- | |- | ||
|} | |} | ||
Revision as of 11:21, 24 July 2007
This is an example how information is organized in our wiki:
| Template:Infobox header| Name of substrate protein | |
|---|---|
| Name of substrate protein | |
| Substrate peptide name | Name of substrate protein |
| Synonyms | Alternative scientific name(s) of substrate protein |
| Determination type | In situ/In vitro |
| Source | Species in which the protein was studied |
| Subcellular localization | Ex. Plasma membrane |
| Swissprot ID | Link to the protein's Uniprot ID |
| Reactive glutamines | Glutamine residues modified by the enzyme
If the crystal structure is available, a link to the picture of modified residues is included |
| Reactive lysines | Lysine residues modified by the enzyme
If the crystal structure is available, a link to the picture of modified residues is included |
| Substrate sequence | Sequence containing the residue modified by the enzyme
with the modified residue(s) in italic |
| Structure | Link to the crystal structure (if available) deposited in RCSB webPDB |
| Surface accessibility | Surface accessibility data obtained with ASAView web server for those substrate proteins
where the modification site is known and the crystal structure contains these residues |
| Disorder prediction | Link to IUPredpredictor of intrinsically disorder in proteins |
| Reference | Links to scientific article(s) about determination of transglutaminase substrate proteins through the PubMed ID:PMID |
| Notes | Relevant informations other than above mentioned about substrate proteins |
| Template:Infobox header | | |
