MyMediaWiki:About the articles

From MyMediaWiki
Revision as of 08:33, 25 December 2007 by WikiSysop (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

This is an example how information is organized in our wiki:

Template:Infobox header| Name of substrate protein
Substrate protein - where it is available
Substrate peptide name Name of substrate protein
Synonyms Alternative scientific name(s) of substrate protein
Determination type In situ/In vitro
Source Species in which the protein was studied
Subcellular localization Cellular compartment where the substrate protein can be found
Swissprot ID Link to the protein's Uniprot page
Reactive glutamines Glutamine residues modified by the enzyme

If the crystal structure is available, a link to the picture of modified residue(s) is included

Reactive lysines Lysine residues modified by the enzyme

If the crystal structure is available, a link to the picture of modified residue(s) is included

Substrate sequence Sequence portion containing the residue modified by the enzyme

with the modified residue(s) in italic

Structure Link to the crystal structure (if available) deposited in RCSB PDB
Surface accessibility Surface accessibility data obtained with ASAView web server for those substrate proteins

where the modification site is known and the crystal structure contains these residues

Disorder prediction Link to IUPreda predictor of intrinsic disorder in proteins
Reference Links to scientific article(s) about determination of transglutaminase substrate proteins through their PubMed ID:PMID
Notes Relevant informations other than above mentioned about substrate proteins
Video Video file of the rotating molecule from YouTube, created with VMD
Template:Infobox header |